Graduate Student Researcher
Dept. of Computer Science & Engineering
⇾ Conduct research on machine learning, representation learning, and generative modeling applied to protein and antibody systems, with an emphasis on scalable and generalizable model design.
⇾ Designed, trained and fine-tuned protein language models and contrastive representation learning frameworks to capture binding behavior and mutation-driven effects across antibody–antigen pairs.
⇾ Developed structure-aware learning approaches that integrate sequence and 3D structural information, demonstrating improved predictive performance over sequence-only models.
⇾ Built generative and discriminative ML pipelines for antibody interaction modeling, embedding learning, and binding classification across large-scale datasets (500K+ samples).
⇾ Created SPICE, an end-to-end, production-grade web platform for structural protein–protein interaction analysis, enabling comparative analysis of contacts, energetics, and geometric features across variants.
⇾ Published research in peer-reviewed journals, conferences and workshops (JCIM, PLOS, AAAI, NeurIPS) and collaborated with interdisciplinary teams spanning machine learning and computational biology.